STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS03639.1Regulatory protein, luxR family. (972 aa)    
Predicted Functional Partners:
SDS79204.1
Signal transduction histidine kinase.
  
 0.991
SDS30543.1
GAF domain-containing protein.
  
 0.985
SDR72750.1
Regulatory protein, luxR family; Manually curated.
 
 0.907
SDS43679.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.842
SDS52869.1
PAS domain S-box-containing protein.
  
 0.794
SDS53034.1
GAF domain-containing protein.
  
 0.794
SDS91351.1
Tetratricopeptide repeat-containing protein.
  
 
  0.690
SDT08789.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.636
SDS03661.1
SnoaL-like domain-containing protein.
 
     0.635
SDS61584.1
Predicted ATPase.
 
  
 0.553
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.