STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS10494.1Hyaluronate lyase. (863 aa)    
Predicted Functional Partners:
SDS39691.1
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat.
 
     0.768
SDS98549.1
Ig-like domain (group 2).
 
  
  0.742
SDS34255.1
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat.
  
     0.734
SDS53076.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.730
SDR86149.1
Protein of unknown function.
  
     0.694
SDT13258.1
Hypothetical protein.
  
     0.672
SDR86610.1
Protein of unknown function.
  
    0.671
SDS15848.1
Hypothetical protein.
  
     0.630
SDS89296.1
Glycosyl hydrolase catalytic core.
  
  
  0.612
SDS78461.1
Xylan 1,4-beta-xylosidase.
  
     0.566
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.