Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR86848.1 | SDS31979.1 | SAMN04489717_0850 | SAMN04489717_2316 | TIGR03083 family protein. | Transcriptional regulator, contains XRE-family HTH domain. | 0.490 |
SDS31970.1 | SDS31979.1 | SAMN04489717_2315 | SAMN04489717_2316 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG. | Transcriptional regulator, contains XRE-family HTH domain. | 0.561 |
SDS31970.1 | SDS32020.1 | SAMN04489717_2315 | SAMN04489717_2317 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG. | Phosphinothricin acetyltransferase. | 0.452 |
SDS31979.1 | SDR86848.1 | SAMN04489717_2316 | SAMN04489717_0850 | Transcriptional regulator, contains XRE-family HTH domain. | TIGR03083 family protein. | 0.490 |
SDS31979.1 | SDS31970.1 | SAMN04489717_2316 | SAMN04489717_2315 | Transcriptional regulator, contains XRE-family HTH domain. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG. | 0.561 |
SDS31979.1 | SDS32020.1 | SAMN04489717_2316 | SAMN04489717_2317 | Transcriptional regulator, contains XRE-family HTH domain. | Phosphinothricin acetyltransferase. | 0.688 |
SDS31979.1 | SDT26477.1 | SAMN04489717_2316 | SAMN04489717_5775 | Transcriptional regulator, contains XRE-family HTH domain. | TIGR03083 family protein. | 0.490 |
SDS32020.1 | SDS31970.1 | SAMN04489717_2317 | SAMN04489717_2315 | Phosphinothricin acetyltransferase. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG. | 0.452 |
SDS32020.1 | SDS31979.1 | SAMN04489717_2317 | SAMN04489717_2316 | Phosphinothricin acetyltransferase. | Transcriptional regulator, contains XRE-family HTH domain. | 0.688 |
SDT26477.1 | SDS31979.1 | SAMN04489717_5775 | SAMN04489717_2316 | TIGR03083 family protein. | Transcriptional regulator, contains XRE-family HTH domain. | 0.490 |