STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS34422.1Heparinase II/III-like protein. (652 aa)    
Predicted Functional Partners:
SDS34661.1
FAD dependent oxidoreductase.
  
     0.619
SDT09377.1
alpha-L-fucosidase.
  
     0.599
SDS95315.1
Sialidase-1.
  
  
  0.559
SDS30657.1
Xylan 1,4-beta-xylosidase.
  
     0.519
SDS69346.1
Hyaluronate lyase.
 
  
  0.500
SDS34389.1
Shikimate kinase.
       0.482
SDS24044.1
Hyaluronate lyase.
 
  
  0.481
SDR81022.1
Inosine-uridine nucleoside N-ribohydrolase.
  
     0.463
SDS76848.1
Hypothetical glycosyl hydrolase 6.
 
 
  0.462
SDR76605.1
Predicted neuraminidase (sialidase).
  
  
  0.455
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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