Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS35606.1 | SDS35640.1 | SAMN04489717_2434 | SAMN04489717_2435 | Histidine triad (HIT) family protein. | Streptomycin 6-kinase. | 0.628 |
SDS35606.1 | SDS35657.1 | SAMN04489717_2434 | SAMN04489717_2436 | Histidine triad (HIT) family protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.453 |
SDS35606.1 | SDS35693.1 | SAMN04489717_2434 | SAMN04489717_2437 | Histidine triad (HIT) family protein. | Carbohydrate ABC transporter membrane protein 2, CUT1 family. | 0.425 |
SDS35606.1 | SDS35726.1 | SAMN04489717_2434 | SAMN04489717_2438 | Histidine triad (HIT) family protein. | Carbohydrate ABC transporter membrane protein 1, CUT1 family. | 0.425 |
SDS35606.1 | SDS35756.1 | SAMN04489717_2434 | SAMN04489717_2439 | Histidine triad (HIT) family protein. | Carbohydrate ABC transporter substrate-binding protein, CUT1 family. | 0.425 |
SDS35606.1 | SDS35787.1 | SAMN04489717_2434 | SAMN04489717_2440 | Histidine triad (HIT) family protein. | Predicted dehydrogenase. | 0.400 |
SDS35606.1 | SDS35804.1 | SAMN04489717_2434 | SAMN04489717_2441 | Histidine triad (HIT) family protein. | Sugar phosphate isomerase/epimerase. | 0.400 |
SDS35640.1 | SDS35606.1 | SAMN04489717_2435 | SAMN04489717_2434 | Streptomycin 6-kinase. | Histidine triad (HIT) family protein. | 0.628 |
SDS35640.1 | SDS35657.1 | SAMN04489717_2435 | SAMN04489717_2436 | Streptomycin 6-kinase. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.547 |
SDS35640.1 | SDS35693.1 | SAMN04489717_2435 | SAMN04489717_2437 | Streptomycin 6-kinase. | Carbohydrate ABC transporter membrane protein 2, CUT1 family. | 0.511 |
SDS35640.1 | SDS35726.1 | SAMN04489717_2435 | SAMN04489717_2438 | Streptomycin 6-kinase. | Carbohydrate ABC transporter membrane protein 1, CUT1 family. | 0.511 |
SDS35640.1 | SDS35756.1 | SAMN04489717_2435 | SAMN04489717_2439 | Streptomycin 6-kinase. | Carbohydrate ABC transporter substrate-binding protein, CUT1 family. | 0.511 |
SDS35640.1 | SDS35787.1 | SAMN04489717_2435 | SAMN04489717_2440 | Streptomycin 6-kinase. | Predicted dehydrogenase. | 0.478 |
SDS35640.1 | SDS35804.1 | SAMN04489717_2435 | SAMN04489717_2441 | Streptomycin 6-kinase. | Sugar phosphate isomerase/epimerase. | 0.478 |
SDS35657.1 | SDS35606.1 | SAMN04489717_2436 | SAMN04489717_2434 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Histidine triad (HIT) family protein. | 0.453 |
SDS35657.1 | SDS35640.1 | SAMN04489717_2436 | SAMN04489717_2435 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Streptomycin 6-kinase. | 0.547 |
SDS35657.1 | SDS35693.1 | SAMN04489717_2436 | SAMN04489717_2437 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Carbohydrate ABC transporter membrane protein 2, CUT1 family. | 0.718 |
SDS35657.1 | SDS35726.1 | SAMN04489717_2436 | SAMN04489717_2438 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Carbohydrate ABC transporter membrane protein 1, CUT1 family. | 0.718 |
SDS35657.1 | SDS35756.1 | SAMN04489717_2436 | SAMN04489717_2439 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Carbohydrate ABC transporter substrate-binding protein, CUT1 family. | 0.718 |
SDS35657.1 | SDS35787.1 | SAMN04489717_2436 | SAMN04489717_2440 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Predicted dehydrogenase. | 0.673 |
page 1 of 3