STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS38168.1Protein of unknown function. (169 aa)    
Predicted Functional Partners:
SDS79123.1
Protein of unknown function; Manually curated.
  
     0.759
SDR71410.1
Protein of unknown function.
  
     0.643
SDS38175.1
Hypothetical protein.
       0.524
SDS38194.1
DNA-binding transcriptional regulator YhcF, GntR family.
       0.524
SDS38129.1
Catechol 2,3-dioxygenase.
       0.516
SDR68700.1
Hypothetical protein.
  
     0.463
SDR93035.1
Hypothetical protein.
  
     0.455
SDR86472.1
Hypothetical protein.
  
     0.453
SDS68964.1
DSBA-like thioredoxin domain-containing protein.
  
     0.434
SDS38265.1
Methyltransferase domain-containing protein.
       0.413
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.