STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS41729.1Alpha-1,2-mannosidase, putative. (2180 aa)    
Predicted Functional Partners:
SDR74075.1
Hexosaminidase.
 
     0.703
SDT09377.1
alpha-L-fucosidase.
 
     0.702
SDS04957.1
Beta-L-arabinofuranosidase, GH127.
  
     0.674
SDS69010.1
Hexosaminidase.
 
     0.670
SDS38635.1
alpha-L-fucosidase 2.
  
     0.624
SDS41699.1
SnoaL-like domain-containing protein.
       0.598
SDS40112.1
Beta-L-arabinofuranosidase, GH127.
  
     0.595
SDS68559.1
alpha-L-fucosidase 2.
  
     0.584
SDS40231.1
alpha-L-fucosidase.
 
     0.581
SDS38028.1
alpha-L-fucosidase.
 
     0.567
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.