STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS50102.1Hypothetical protein. (260 aa)    
Predicted Functional Partners:
SDS50073.1
Hypothetical protein.
       0.798
SDS74587.1
Glycosyltransferase, GT2 family.
  
 
 0.648
SDS63633.1
Hypothetical protein.
   
 
 0.586
smc
Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
 
 0.586
SDS84077.1
Protein of unknown function.
   
 
 0.532
SDR98077.1
Type VII secretion integral membrane protein EccD.
   
    0.469
SDS50142.1
Hypothetical protein.
       0.461
SDR84088.1
Ca2+-transporting ATPase.
   
    0.422
SDS99863.1
Cation-transporting ATPase I.
   
    0.422
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.