STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS50331.1BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. (276 aa)    
Predicted Functional Partners:
SDS49721.1
acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein.
 
 0.997
SDS93031.1
[acyl-carrier-protein] S-malonyltransferase.
 
 
 
 0.950
SDS50248.1
propionyl-CoA carboxylase carboxyltransferase subunit.
 
 
 0.945
SDR88053.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
 
 0.928
SDS93128.1
acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit.
 
 
 0.924
SDS49835.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
 
 0.919
SDT22798.1
Biotin-requiring enzyme.
    
 0.869
SDS93107.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
   
 0.708
SDS10359.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
   
 0.684
SDS50207.1
Acyl-CoA carboxylase epsilon subunit.
     
 0.661
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.