STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS51988.1Cation diffusion facilitator family transporter. (315 aa)    
Predicted Functional Partners:
SDS51960.1
Mannose-6-phosphate isomerase, type 1.
      0.803
SDS51876.1
Trm112p-like protein; Belongs to the UPF0434 family.
       0.567
SDS51930.1
Phospho-glucose isomerase C-terminal SIS domain-containing protein.
       0.567
SDS70339.1
Hemolysin, contains CBS domains.
 
      0.539
SDS79204.1
Signal transduction histidine kinase.
     
 0.495
SDS48263.1
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate.
  
    0.489
SDS72141.1
Malate dehydrogenase (NAD); Belongs to the LDH/MDH superfamily.
  
    0.489
SDS51842.1
Phosphomannomutase.
  
    0.484
SDS51824.1
Protein of unknown function; Manually curated.
       0.415
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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