STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS53594.1Flp pilus assembly protein TadG. (147 aa)    
Predicted Functional Partners:
SDS53501.1
Tight adherence protein B.
 
  
 0.974
SDS53534.1
Tight adherence protein C.
 
  
 0.974
SDS52704.1
AAA domain-containing protein.
 
  
 0.962
SDS53623.1
Hypothetical protein.
 
     0.956
SDS53461.1
Pilus assembly protein CpaF.
 
  
 0.941
SDR70031.1
Flp pilus assembly protein CpaB.
  
  
 0.842
SDS53570.1
Hypothetical protein.
       0.815
SDS52698.1
Hypothetical protein.
 
    0.812
SDS53648.1
Putative Flp pilus-assembly TadE/G-like.
       0.804
SDS52673.1
Hypothetical protein.
  
     0.753
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.