Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS54409.1 | SDS54427.1 | SAMN04489717_3034 | SAMN04489717_3035 | Menaquinone-dependent protoporphyrinogen oxidase. | Flavodoxin domain-containing protein. | 0.705 |
SDS54409.1 | SDS54464.1 | SAMN04489717_3034 | SAMN04489717_3036 | Menaquinone-dependent protoporphyrinogen oxidase. | Uncharacterized membrane protein HdeD, DUF308 family. | 0.419 |
SDS54427.1 | SDS54409.1 | SAMN04489717_3035 | SAMN04489717_3034 | Flavodoxin domain-containing protein. | Menaquinone-dependent protoporphyrinogen oxidase. | 0.705 |
SDS54427.1 | SDS54464.1 | SAMN04489717_3035 | SAMN04489717_3036 | Flavodoxin domain-containing protein. | Uncharacterized membrane protein HdeD, DUF308 family. | 0.453 |
SDS54464.1 | SDS54409.1 | SAMN04489717_3036 | SAMN04489717_3034 | Uncharacterized membrane protein HdeD, DUF308 family. | Menaquinone-dependent protoporphyrinogen oxidase. | 0.419 |
SDS54464.1 | SDS54427.1 | SAMN04489717_3036 | SAMN04489717_3035 | Uncharacterized membrane protein HdeD, DUF308 family. | Flavodoxin domain-containing protein. | 0.453 |
SDS54464.1 | SDS99877.1 | SAMN04489717_3036 | SAMN04489717_4645 | Uncharacterized membrane protein HdeD, DUF308 family. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.425 |
SDS54464.1 | SDT22201.1 | SAMN04489717_3036 | SAMN04489717_5558 | Uncharacterized membrane protein HdeD, DUF308 family. | Putative Mg2+ transporter-C (MgtC) family protein. | 0.601 |
SDS99877.1 | SDS54464.1 | SAMN04489717_4645 | SAMN04489717_3036 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Uncharacterized membrane protein HdeD, DUF308 family. | 0.425 |
SDS99877.1 | SDT22201.1 | SAMN04489717_4645 | SAMN04489717_5558 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Putative Mg2+ transporter-C (MgtC) family protein. | 0.432 |
SDT22201.1 | SDS54464.1 | SAMN04489717_5558 | SAMN04489717_3036 | Putative Mg2+ transporter-C (MgtC) family protein. | Uncharacterized membrane protein HdeD, DUF308 family. | 0.601 |
SDT22201.1 | SDS99877.1 | SAMN04489717_5558 | SAMN04489717_4645 | Putative Mg2+ transporter-C (MgtC) family protein. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.432 |