STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS57517.1Predicted DNA-binding transcriptional regulator AlpA. (62 aa)    
Predicted Functional Partners:
SDS57531.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
 
     0.935
SDT02413.1
Glutamate synthase (NADH) large subunit.
    
  0.876
SDS26910.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.789
SDS57479.1
Hypothetical protein.
 
     0.766
SDR88053.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
  
  0.679
SDT21824.1
Methyltransferase domain-containing protein.
  
     0.509
SDS71444.1
Superoxide dismutase, Cu-Zn family.
  
     0.498
SDS57395.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
       0.413
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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