STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS64127.1Transglutaminase-like superfamily protein. (307 aa)    
Predicted Functional Partners:
SDR80111.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
   0.748
SDS65131.1
Chlorophyll synthase.
  
     0.586
SDS63373.1
Predicted alpha-1,6-mannanase, GH76 family.
  
     0.567
SDS00788.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
  
     0.563
SDR88840.1
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family.
  
     0.542
SDR74381.1
Alpha-galactosidase.
  
     0.483
SDS61087.1
Glycosyl hydrolase family 67 N-terminus.
  
     0.478
SDR70925.1
Sulfonate transport system substrate-binding protein.
  
     0.462
SDS74087.1
Glycosyl hydrolase family 67 N-terminus.
  
     0.460
SDR72350.1
Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.459
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.