STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS65931.1Deazaflavin-dependent oxidoreductase, nitroreductase family. (146 aa)    
Predicted Functional Partners:
SDS51596.1
Coenzyme F420-0 gamma-glutamyl ligase.
  
   
 0.775
SDS51629.1
LPPG:FO 2-phospho-L-lactate transferase.
  
   
 0.767
SDR77802.1
Probable F420-dependent oxidoreductase, MSMEG_2906 family.
  
  
  0.763
fbiD
2-phospho-L-lactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
  
   
 0.747
SDT08465.1
Coenzyme F420-dependent glucose-6-phosphate dehydrogenase.
  
  
  0.744
SDS81672.1
Probable F420-dependent oxidoreductase, Rv1855c family.
  
  
  0.742
SDS40022.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
  
  0.741
SDS99641.1
Probable F420-dependent oxidoreductase, Rv3520c family.
  
  
  0.734
SDT01379.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
  
  0.678
SDT15908.1
Probable F420-dependent oxidoreductase, Rv1855c family.
  
  
  0.631
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.