STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS67457.1Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. (324 aa)    
Predicted Functional Partners:
SDR87891.1
DNA-binding transcriptional regulator, HxlR family.
   
    0.804
SDT09404.1
NAD-dependent deacetylase.
   
    0.797
SDT20752.1
DNA-binding transcriptional regulator, MarR family.
   
    0.711
SDT09887.1
Predicted transcriptional regulator, ArsR family.
   
    0.681
SDS41935.1
Uncharacterized conserved protein PhnB, glyoxalase superfamily.
   
    0.629
SDR78814.1
Cell envelope-related function transcriptional attenuator common domain-containing protein.
   
    0.617
SDS51053.1
Cell envelope-related function transcriptional attenuator common domain-containing protein.
   
    0.617
SDR76750.1
AraC family transcriptional regulator, cel operon repressor.
 
   0.589
SDS67488.1
HD domain-containing protein.
 
     0.574
SDR87357.1
DJ-1/PfpI family protein.
 
  
 
0.542
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.