STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS71763.1Predicted dehydrogenase. (393 aa)    
Predicted Functional Partners:
SDS71787.1
Sugar phosphate isomerase/epimerase.
 
 
  0.946
SDT05718.1
Inosose dehydratase.
 
 
  0.825
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
  
  0.758
SDR68380.1
Sugar phosphate isomerase/epimerase.
  
 
  0.711
SDS58548.1
Inosose dehydratase.
  
 
  0.628
SDS71698.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
       0.584
SDR87501.1
Predicted dehydrogenase.
  
     0.573
SDR86719.1
Predicted dehydrogenase.
  
     0.544
SDS43828.1
Predicted dehydrogenase.
  
     0.535
SDS49850.1
Sugar phosphate isomerase/epimerase.
 
 
  0.526
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.