Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDR70925.1 | SDR80210.1 | SAMN04489717_0192 | SAMN04489717_0622 | Sulfonate transport system substrate-binding protein. | Formate dehydrogenase major subunit; Manually curated; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.906 |
| SDR70925.1 | SDS72504.1 | SAMN04489717_0192 | SAMN04489717_3654 | Sulfonate transport system substrate-binding protein. | Bacterioferritin-associated ferredoxin. | 0.590 |
| SDR70925.1 | SDT02413.1 | SAMN04489717_0192 | SAMN04489717_4745 | Sulfonate transport system substrate-binding protein. | Glutamate synthase (NADH) large subunit. | 0.685 |
| SDR70925.1 | ssuB | SAMN04489717_0192 | SAMN04489717_0194 | Sulfonate transport system substrate-binding protein. | Sulfonate transport system ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.999 |
| SDR80210.1 | SDR70925.1 | SAMN04489717_0622 | SAMN04489717_0192 | Formate dehydrogenase major subunit; Manually curated; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Sulfonate transport system substrate-binding protein. | 0.906 |
| SDR80210.1 | SDS68994.1 | SAMN04489717_0622 | SAMN04489717_3534 | Formate dehydrogenase major subunit; Manually curated; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Fucose permease. | 0.844 |
| SDR80210.1 | SDS72504.1 | SAMN04489717_0622 | SAMN04489717_3654 | Formate dehydrogenase major subunit; Manually curated; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Bacterioferritin-associated ferredoxin. | 0.795 |
| SDR80210.1 | SDS82945.1 | SAMN04489717_0622 | SAMN04489717_4022 | Formate dehydrogenase major subunit; Manually curated; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.901 |
| SDR80210.1 | SDT02413.1 | SAMN04489717_0622 | SAMN04489717_4745 | Formate dehydrogenase major subunit; Manually curated; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Glutamate synthase (NADH) large subunit. | 0.993 |
| SDR80210.1 | SDT13503.1 | SAMN04489717_0622 | SAMN04489717_5165 | Formate dehydrogenase major subunit; Manually curated; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.961 |
| SDR80210.1 | SDT27077.1 | SAMN04489717_0622 | SAMN04489717_5808 | Formate dehydrogenase major subunit; Manually curated; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | MFS transporter, NNP family, nitrate/nitrite transporter. | 0.844 |
| SDR80210.1 | ssuB | SAMN04489717_0622 | SAMN04489717_0194 | Formate dehydrogenase major subunit; Manually curated; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Sulfonate transport system ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.891 |
| SDS68994.1 | SDR80210.1 | SAMN04489717_3534 | SAMN04489717_0622 | Fucose permease. | Formate dehydrogenase major subunit; Manually curated; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.844 |
| SDS68994.1 | SDS72504.1 | SAMN04489717_3534 | SAMN04489717_3654 | Fucose permease. | Bacterioferritin-associated ferredoxin. | 0.524 |
| SDS68994.1 | SDS82945.1 | SAMN04489717_3534 | SAMN04489717_4022 | Fucose permease. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.530 |
| SDS68994.1 | SDT13503.1 | SAMN04489717_3534 | SAMN04489717_5165 | Fucose permease. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.784 |
| SDS72488.1 | SDS72504.1 | SAMN04489717_3653 | SAMN04489717_3654 | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Bacterioferritin-associated ferredoxin. | 0.990 |
| SDS72504.1 | SDR70925.1 | SAMN04489717_3654 | SAMN04489717_0192 | Bacterioferritin-associated ferredoxin. | Sulfonate transport system substrate-binding protein. | 0.590 |
| SDS72504.1 | SDR80210.1 | SAMN04489717_3654 | SAMN04489717_0622 | Bacterioferritin-associated ferredoxin. | Formate dehydrogenase major subunit; Manually curated; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.795 |
| SDS72504.1 | SDS68994.1 | SAMN04489717_3654 | SAMN04489717_3534 | Bacterioferritin-associated ferredoxin. | Fucose permease. | 0.524 |
page 1 of 3