STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS74206.1SagB-type dehydrogenase domain-containing protein. (299 aa)    
Predicted Functional Partners:
SDS74166.1
Thiazole/oxazole-forming peptide maturase, SagD family component.
 
  
 0.913
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
  
 
 0.773
SDS82845.1
uroporphyrinogen-III C-methyltransferase.
    
 0.727
SDS25121.1
uroporphyrinogen-III synthase.
  
 
 0.665
SDS74220.1
Squalene-hopene cyclase C-terminal domain-containing protein.
       0.533
SDS74247.1
Hypothetical protein.
       0.533
SDS74274.1
Hypothetical protein.
       0.533
SDS74300.1
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
       0.533
SDT24102.1
Adenylyltransferase and sulfurtransferase.
    
  0.511
SDS92476.1
Probable phosphoglycerate mutase.
    
  0.501
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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