Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS80362.1 | SDS80387.1 | SAMN04489717_3931 | SAMN04489717_3932 | DNA-binding transcriptional regulator, MarR family. | Threonine/homoserine/homoserine lactone efflux protein. | 0.639 |
SDS80362.1 | SDS80422.1 | SAMN04489717_3931 | SAMN04489717_3933 | DNA-binding transcriptional regulator, MarR family. | Predicted nicotinamide N-methyase. | 0.429 |
SDS80362.1 | SDS80454.1 | SAMN04489717_3931 | SAMN04489717_3934 | DNA-binding transcriptional regulator, MarR family. | Phosphotransferase enzyme family protein. | 0.429 |
SDS80387.1 | SDS80362.1 | SAMN04489717_3932 | SAMN04489717_3931 | Threonine/homoserine/homoserine lactone efflux protein. | DNA-binding transcriptional regulator, MarR family. | 0.639 |
SDS80387.1 | SDS80422.1 | SAMN04489717_3932 | SAMN04489717_3933 | Threonine/homoserine/homoserine lactone efflux protein. | Predicted nicotinamide N-methyase. | 0.548 |
SDS80387.1 | SDS80454.1 | SAMN04489717_3932 | SAMN04489717_3934 | Threonine/homoserine/homoserine lactone efflux protein. | Phosphotransferase enzyme family protein. | 0.548 |
SDS80422.1 | SDS80362.1 | SAMN04489717_3933 | SAMN04489717_3931 | Predicted nicotinamide N-methyase. | DNA-binding transcriptional regulator, MarR family. | 0.429 |
SDS80422.1 | SDS80387.1 | SAMN04489717_3933 | SAMN04489717_3932 | Predicted nicotinamide N-methyase. | Threonine/homoserine/homoserine lactone efflux protein. | 0.548 |
SDS80422.1 | SDS80454.1 | SAMN04489717_3933 | SAMN04489717_3934 | Predicted nicotinamide N-methyase. | Phosphotransferase enzyme family protein. | 0.773 |
SDS80454.1 | SDS80362.1 | SAMN04489717_3934 | SAMN04489717_3931 | Phosphotransferase enzyme family protein. | DNA-binding transcriptional regulator, MarR family. | 0.429 |
SDS80454.1 | SDS80387.1 | SAMN04489717_3934 | SAMN04489717_3932 | Phosphotransferase enzyme family protein. | Threonine/homoserine/homoserine lactone efflux protein. | 0.548 |
SDS80454.1 | SDS80422.1 | SAMN04489717_3934 | SAMN04489717_3933 | Phosphotransferase enzyme family protein. | Predicted nicotinamide N-methyase. | 0.773 |