STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS86562.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (255 aa)    
Predicted Functional Partners:
SDT02413.1
Glutamate synthase (NADH) large subunit.
     
 0.794
SDT13503.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 0.790
SDS93031.1
[acyl-carrier-protein] S-malonyltransferase.
  
 0.766
SDS14756.1
Phosphocarrier protein HPr; Belongs to the PEP-utilizing enzyme family.
     
 0.745
SDS93622.1
Hypothetical protein.
    
  0.698
SDR73625.1
Gluconate 5-dehydrogenase.
  
     0.664
SDS78189.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
  
     0.572
SDS87239.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
   
 
  0.551
SDT23590.1
ATP-dependent DNA helicase, Rep family.
    
   0.548
SDS26910.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.547
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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