STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS92169.1Polyhydroxybutyrate depolymerase. (320 aa)    
Predicted Functional Partners:
SDR69512.1
Enterochelin esterase.
    
   0.609
SDS90028.1
Putative esterase.
    
   0.609
SDT24432.1
S-formylglutathione hydrolase FrmB.
    
   0.609
SDS78784.1
Endo-1,4-beta-xylanase.
   
   0.600
SDS93457.1
Hypothetical protein.
 
 
   0.593
SDS18244.1
FG-GAP repeat-containing protein.
   
   0.533
SDS28907.1
Carbohydrate family 9 binding domain-like.
   
   0.533
SDS42139.1
FG-GAP repeat-containing protein.
   
   0.533
SDS92196.1
Uridine kinase.
       0.514
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.