STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS96723.1Glycosyl hydrolases family 2. (927 aa)    
Predicted Functional Partners:
SDS50761.1
Alpha-galactosidase.
 
  
  0.878
SDR77448.1
Alpha galactosidase A.
  
  
  0.795
SDS14091.1
Beta-galactosidase.
  
  
 
0.790
SDS96753.1
Hypothetical protein.
     
 0.783
SDS96779.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.773
SDS96824.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
       0.773
SDS96859.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
       0.773
SDR87823.1
Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
  0.767
SDR75322.1
Glycosyl hydrolase family 30; Belongs to the glycosyl hydrolase 30 family.
 
  
  0.745
uxaC
Glucuronate isomerase.
  
 
 0.730
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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