STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS98417.1Probable F420-dependent oxidoreductase, Rv1855c family. (302 aa)    
Predicted Functional Partners:
SDS51596.1
Coenzyme F420-0 gamma-glutamyl ligase.
 
  
 0.751
SDS22296.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
  
 0.682
SDS10897.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
  
  0.677
SDS51629.1
LPPG:FO 2-phospho-L-lactate transferase.
  
   
 0.671
SDT01379.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
     0.664
SDS98451.1
Transcriptional regulator, AsnC family.
       0.536
SDS98393.1
DNA-binding transcriptional regulator, PadR family.
       0.533
SDS65931.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
  
  0.526
SDT14504.1
Probable F420-dependent oxidoreductase, MSMEG_4141 family.
  
     0.525
SDR70925.1
Sulfonate transport system substrate-binding protein.
   
 
  0.480
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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