STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS99504.1Conserved hypothetical protein. (284 aa)    
Predicted Functional Partners:
SDR77771.1
Hypothetical protein.
    
 0.974
SDS99526.1
Conserved hypothetical protein.
 
    0.942
SDS99554.1
Probable phosphomutase, MSMEG_4193 family.
 
     0.930
SDS69486.1
Helicase conserved C-terminal domain-containing protein.
   
 0.929
SDS69506.1
SNF2 Helicase protein; Manually curated.
   
 0.929
serS
seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
    
   0.873
SDR80330.1
Hypothetical protein.
    
  0.870
SDR83754.1
Phosphoribulokinase.
    
  0.870
SDS92196.1
Uridine kinase.
    
  0.870
SDS24772.1
Acetoin utilization protein AcuC.
    
  0.866
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.