STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT05049.1ABC-type glycerol-3-phosphate transport system, substrate-binding protein. (465 aa)    
Predicted Functional Partners:
SDT05013.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.952
SDT05010.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.946
SDT06935.1
Alpha-glucoside transport system permease protein.
  
  0.860
SDR72717.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.767
SDR96629.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.750
SDR96596.1
Cellobiose transport system permease protein.
  
  0.747
SDS94256.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
  
  0.744
SDS63180.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.736
SDS35726.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.731
SDS33557.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.717
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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