STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT07524.1Hypothetical protein. (298 aa)    
Predicted Functional Partners:
SDR82190.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
    0.786
SDT27097.1
2-polyprenyl-6-methoxyphenol hydroxylase.
 
      0.747
SDR92355.1
Sulfofructosephosphate aldolase.
   
    0.620
SDS10542.1
Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase.
   
    0.616
SDT07495.1
2-oxoglutarate dehydrogenase E2 component.
  
    0.611
SDS37362.1
Hypothetical protein.
  
    0.502
SDS65256.1
Hypothetical protein; Manually curated.
  
    0.502
SDS84395.1
Protein of unknown function.
   
    0.476
SDR83266.1
CsbD-like; Belongs to the UPF0337 (CsbD) family.
   
    0.474
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
    0.465
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.