STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT10736.1Hypothetical protein. (282 aa)    
Predicted Functional Partners:
SDS79204.1
Signal transduction histidine kinase.
   
 0.829
SDT10761.1
Hypothetical protein.
       0.773
SDS30543.1
GAF domain-containing protein.
    
 0.737
SDR68244.1
Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster.
    
   0.512
SDR74464.1
Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster.
    
   0.512
SDR78640.1
Chain length determinant protein.
    
   0.512
SDS97052.1
Receptor protein-tyrosine kinase.
    
   0.512
SDS30657.1
Xylan 1,4-beta-xylosidase.
  
     0.511
SDT10708.1
Hypothetical protein.
       0.494
SDR95871.1
FHA domain-containing protein.
    
   0.493
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.