STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT24215.1Protein of unknown function. (75 aa)    
Predicted Functional Partners:
whiB-9
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.738
SDS69188.1
DNA helicase IV; Manually curated.
  
     0.661
SDT15217.1
Protein of unknown function.
  
     0.625
whiB-5
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.600
SDT01670.1
DNA helicase IV.
  
     0.598
SDT24238.1
Transglycosylase associated protein.
       0.540
SDS98617.1
ATP-dependent RNA helicase HelY.
  
     0.529
SDR68700.1
Hypothetical protein.
  
     0.518
SDS81420.1
Protein of unknown function.
  
     0.495
SDS54982.1
Protein of unknown function.
  
     0.485
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.