Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR67924.1 | SDS24327.1 | SAMN04489717_0005 | SAMN04489717_2066 | Hypothetical protein. | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | 0.924 |
SDR67924.1 | SDS50417.1 | SAMN04489717_0005 | SAMN04489717_2904 | Hypothetical protein. | HD domain-containing protein. | 0.720 |
SDR67924.1 | SDS84046.1 | SAMN04489717_0005 | SAMN04489717_4065 | Hypothetical protein. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.720 |
SDR67924.1 | SDT17329.1 | SAMN04489717_0005 | SAMN04489717_5337 | Hypothetical protein. | Hypothetical protein. | 0.730 |
SDR67924.1 | SDT27417.1 | SAMN04489717_0005 | SAMN04489717_5826 | Hypothetical protein. | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | 0.811 |
SDR67924.1 | SDT27436.1 | SAMN04489717_0005 | SAMN04489717_5827 | Hypothetical protein. | Cell division protein FtsB. | 0.416 |
SDR67924.1 | ppk | SAMN04489717_0005 | SAMN04489717_0580 | Hypothetical protein. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.761 |
SDS24327.1 | SDR67924.1 | SAMN04489717_2066 | SAMN04489717_0005 | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | Hypothetical protein. | 0.924 |
SDS24327.1 | SDS84046.1 | SAMN04489717_2066 | SAMN04489717_4065 | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.880 |
SDS24327.1 | SDT27417.1 | SAMN04489717_2066 | SAMN04489717_5826 | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | 0.835 |
SDS24327.1 | ppk | SAMN04489717_2066 | SAMN04489717_0580 | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.868 |
SDS50417.1 | SDR67924.1 | SAMN04489717_2904 | SAMN04489717_0005 | HD domain-containing protein. | Hypothetical protein. | 0.720 |
SDS50417.1 | SDT27417.1 | SAMN04489717_2904 | SAMN04489717_5826 | HD domain-containing protein. | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | 0.720 |
SDS50417.1 | aroB | SAMN04489717_2904 | SAMN04489717_4086 | HD domain-containing protein. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.461 |
SDS84046.1 | SDR67924.1 | SAMN04489717_4065 | SAMN04489717_0005 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Hypothetical protein. | 0.720 |
SDS84046.1 | SDS24327.1 | SAMN04489717_4065 | SAMN04489717_2066 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | 0.880 |
SDS84046.1 | SDT27417.1 | SAMN04489717_4065 | SAMN04489717_5826 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | 0.720 |
SDS84046.1 | aroB | SAMN04489717_4065 | SAMN04489717_4086 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.579 |
SDT17329.1 | SDR67924.1 | SAMN04489717_5337 | SAMN04489717_0005 | Hypothetical protein. | Hypothetical protein. | 0.730 |
SDT17329.1 | SDT27417.1 | SAMN04489717_5337 | SAMN04489717_5826 | Hypothetical protein. | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | 0.730 |
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