Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A4X09_g1287 | A4X09_g6714 | A0A177V0T2 | A0A177UAZ4 | GLUE N-terminal domain-containing protein. | RT_RNaseH domain-containing protein. | 0.496 |
A4X09_g255 | A4X09_g3651 | A0A177V3U5 | A0A177UQL1 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.554 |
A4X09_g255 | A4X09_g6183 | A0A177V3U5 | A0A177UD54 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.997 |
A4X09_g255 | A4X09_g6714 | A0A177V3U5 | A0A177UAZ4 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | RT_RNaseH domain-containing protein. | 0.437 |
A4X09_g255 | A4X09_g7028 | A0A177V3U5 | A0A177U7E5 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.554 |
A4X09_g255 | MED6 | A0A177V3U5 | A0A177V465 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.998 |
A4X09_g3651 | A4X09_g255 | A0A177UQL1 | A0A177V3U5 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.554 |
A4X09_g3651 | A4X09_g6183 | A0A177UQL1 | A0A177UD54 | Uncharacterized protein. | Uncharacterized protein. | 0.554 |
A4X09_g3651 | A4X09_g6714 | A0A177UQL1 | A0A177UAZ4 | Uncharacterized protein. | RT_RNaseH domain-containing protein. | 0.497 |
A4X09_g3651 | MED6 | A0A177UQL1 | A0A177V465 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.554 |
A4X09_g4097 | A4X09_g6350 | A0A177UM99 | A0A177UB78 | dUTPase domain-containing protein. | Uncharacterized protein. | 0.788 |
A4X09_g4097 | A4X09_g6438 | A0A177UM99 | A0A177UBP9 | dUTPase domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.674 |
A4X09_g4097 | A4X09_g6714 | A0A177UM99 | A0A177UAZ4 | dUTPase domain-containing protein. | RT_RNaseH domain-containing protein. | 0.489 |
A4X09_g4152 | A4X09_g6350 | A0A177UM29 | A0A177UB78 | Uncharacterized protein. | Uncharacterized protein. | 0.788 |
A4X09_g4152 | A4X09_g6438 | A0A177UM29 | A0A177UBP9 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.674 |
A4X09_g4152 | A4X09_g6714 | A0A177UM29 | A0A177UAZ4 | Uncharacterized protein. | RT_RNaseH domain-containing protein. | 0.489 |
A4X09_g6183 | A4X09_g255 | A0A177UD54 | A0A177V3U5 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.997 |
A4X09_g6183 | A4X09_g3651 | A0A177UD54 | A0A177UQL1 | Uncharacterized protein. | Uncharacterized protein. | 0.554 |
A4X09_g6183 | A4X09_g6714 | A0A177UD54 | A0A177UAZ4 | Uncharacterized protein. | RT_RNaseH domain-containing protein. | 0.436 |
A4X09_g6183 | A4X09_g7028 | A0A177UD54 | A0A177U7E5 | Uncharacterized protein. | Uncharacterized protein. | 0.554 |
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