STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4X09_g5366bVLRF1 domain-containing protein. (884 aa)    
Predicted Functional Partners:
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export.
    
   0.858
CDC48
Cell division control protein 48; Belongs to the AAA ATPase family.
    
 
 0.854
A4X09_g2566
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 
 0.854
A4X09_g29
Uncharacterized protein.
   
 
 0.843
A4X09_g2529
U-box domain-containing protein.
    
 
 0.604
rpl3
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.569
A4X09_g6120
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
    
 
 0.560
A4X09_g5277
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
    
   0.558
A4X09_g4903
Ribosomal_L7Ae domain-containing protein.
    
   0.558
A4X09_g4370
Uncharacterized protein.
    
   0.558
Your Current Organism:
Tilletia walkeri
NCBI taxonomy Id: 117179
Other names: T. walkeri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.