Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A4X09_g1384 | A4X09_g2812 | A0A177UZ78 | A0A177UTR4 | Uncharacterized protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.993 |
A4X09_g1384 | A4X09_g4114 | A0A177UZ78 | A0A177UM78 | Uncharacterized protein. | Uncharacterized protein. | 0.994 |
A4X09_g1384 | A4X09_g5213 | A0A177UZ78 | A0A177UHW9 | Uncharacterized protein. | Uncharacterized protein. | 0.995 |
A4X09_g1384 | A4X09_g5885 | A0A177UZ78 | A0A177UDK5 | Uncharacterized protein. | Brix domain-containing protein. | 0.994 |
A4X09_g1384 | A4X09_g6679 | A0A177UZ78 | A0A177UBU7 | Uncharacterized protein. | 60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.992 |
A4X09_g1384 | A4X09_g7806 | A0A177UZ78 | A0A177U2N3 | Uncharacterized protein. | RRM domain-containing protein. | 0.998 |
A4X09_g1384 | A4X09_g853 | A0A177UZ78 | A0A177V273 | Uncharacterized protein. | Brix domain-containing protein. | 0.994 |
A4X09_g1384 | ERB1 | A0A177UZ78 | A0A177V2C7 | Uncharacterized protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.994 |
A4X09_g1384 | NOP7 | A0A177UZ78 | A0A177V0N4 | Uncharacterized protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.988 |
A4X09_g1384 | YTM1 | A0A177UZ78 | A0A177UBZ8 | Uncharacterized protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.992 |
A4X09_g2812 | A4X09_g1384 | A0A177UTR4 | A0A177UZ78 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Uncharacterized protein. | 0.993 |
A4X09_g2812 | A4X09_g4114 | A0A177UTR4 | A0A177UM78 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Uncharacterized protein. | 0.996 |
A4X09_g2812 | A4X09_g5213 | A0A177UTR4 | A0A177UHW9 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Uncharacterized protein. | 0.995 |
A4X09_g2812 | A4X09_g5885 | A0A177UTR4 | A0A177UDK5 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Brix domain-containing protein. | 0.992 |
A4X09_g2812 | A4X09_g6679 | A0A177UTR4 | A0A177UBU7 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.997 |
A4X09_g2812 | A4X09_g7806 | A0A177UTR4 | A0A177U2N3 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | RRM domain-containing protein. | 0.995 |
A4X09_g2812 | A4X09_g853 | A0A177UTR4 | A0A177V273 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Brix domain-containing protein. | 0.992 |
A4X09_g2812 | ERB1 | A0A177UTR4 | A0A177V2C7 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.995 |
A4X09_g2812 | NOP7 | A0A177UTR4 | A0A177V0N4 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.991 |
A4X09_g2812 | YTM1 | A0A177UTR4 | A0A177UBZ8 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.987 |
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