Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OIQ51833.1 | gltB_1 | BerOc1_00296 | BerOc1_00004 | Glutamine amidotransferases class-II. | Glutamate synthase [NADPH] large chain. | 0.915 |
OIQ51833.1 | gltB_3 | BerOc1_00296 | BerOc1_00008 | Glutamine amidotransferases class-II. | Glutamate synthase [NADPH] large chain precursor. | 0.924 |
OIQ51833.1 | gltD_1 | BerOc1_00296 | BerOc1_00222 | Glutamine amidotransferases class-II. | Glutamate synthase [NADPH] small chain. | 0.980 |
OIQ51833.1 | gltD_2 | BerOc1_00296 | BerOc1_00883 | Glutamine amidotransferases class-II. | Glutamate synthase [NADPH] small chain. | 0.980 |
OIQ51833.1 | gltD_3 | BerOc1_00296 | BerOc1_02199 | Glutamine amidotransferases class-II. | Glutamate synthase [NADPH] small chain. | 0.980 |
OIQ51833.1 | gltD_4 | BerOc1_00296 | BerOc1_02530 | Glutamine amidotransferases class-II. | Glutamate synthase [NADPH] small chain. | 0.980 |
OIQ51833.1 | gltD_5 | BerOc1_00296 | BerOc1_03450 | Glutamine amidotransferases class-II. | Glutamate synthase [NADPH] small chain. | 0.980 |
OIQ51833.1 | preT_1 | BerOc1_00296 | BerOc1_00294 | Glutamine amidotransferases class-II. | NAD-dependent dihydropyrimidine dehydrogenase subunit PreT. | 0.999 |
OIQ51833.1 | preT_2 | BerOc1_00296 | BerOc1_03413 | Glutamine amidotransferases class-II. | NAD-dependent dihydropyrimidine dehydrogenase subunit PreT. | 0.983 |
gltB_1 | OIQ51833.1 | BerOc1_00004 | BerOc1_00296 | Glutamate synthase [NADPH] large chain. | Glutamine amidotransferases class-II. | 0.915 |
gltB_1 | gltB_2 | BerOc1_00004 | BerOc1_00005 | Glutamate synthase [NADPH] large chain. | Glutamate synthase [NADPH] large chain precursor. | 0.999 |
gltB_1 | gltB_3 | BerOc1_00004 | BerOc1_00008 | Glutamate synthase [NADPH] large chain. | Glutamate synthase [NADPH] large chain precursor. | 0.994 |
gltB_1 | gltD_1 | BerOc1_00004 | BerOc1_00222 | Glutamate synthase [NADPH] large chain. | Glutamate synthase [NADPH] small chain. | 0.984 |
gltB_1 | gltD_2 | BerOc1_00004 | BerOc1_00883 | Glutamate synthase [NADPH] large chain. | Glutamate synthase [NADPH] small chain. | 0.983 |
gltB_1 | gltD_3 | BerOc1_00004 | BerOc1_02199 | Glutamate synthase [NADPH] large chain. | Glutamate synthase [NADPH] small chain. | 0.982 |
gltB_1 | gltD_4 | BerOc1_00004 | BerOc1_02530 | Glutamate synthase [NADPH] large chain. | Glutamate synthase [NADPH] small chain. | 0.983 |
gltB_1 | gltD_5 | BerOc1_00004 | BerOc1_03450 | Glutamate synthase [NADPH] large chain. | Glutamate synthase [NADPH] small chain. | 0.984 |
gltB_1 | preT_1 | BerOc1_00004 | BerOc1_00294 | Glutamate synthase [NADPH] large chain. | NAD-dependent dihydropyrimidine dehydrogenase subunit PreT. | 0.982 |
gltB_1 | preT_2 | BerOc1_00004 | BerOc1_03413 | Glutamate synthase [NADPH] large chain. | NAD-dependent dihydropyrimidine dehydrogenase subunit PreT. | 0.982 |
gltB_2 | gltB_1 | BerOc1_00005 | BerOc1_00004 | Glutamate synthase [NADPH] large chain precursor. | Glutamate synthase [NADPH] large chain. | 0.999 |
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