STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phzFTrans-2,3-dihydro-3-hydroxyanthranilate isomerase. (260 aa)    
Predicted Functional Partners:
OIQ51992.1
Macrophage migration inhibitory factor (MIF).
       0.766
mrcA
Penicillin-binding protein 1A.
       0.750
kdsD
Arabinose 5-phosphate isomerase KdsD.
       0.740
OIQ51995.1
Hypothetical protein.
       0.726
OIQ49115.1
SnoaL-like domain protein.
  
 
 0.558
dapF
Diaminopimelate epimerase.
    
 0.511
purF
Amidophosphoribosyltransferase precursor.
       0.487
carB_1
Carbamoyl-phosphate synthase large chain.
       0.439
mcp4_1
Methyl-accepting chemotaxis protein 4.
       0.418
Your Current Organism:
Desulfovibrio dechloracetivorans
NCBI taxonomy Id: 117209
Other names: ATCC 700912, D. dechloracetivorans, Desulfovibrio dechloracetivorans Sun et al. 2001, Desulfovibrio sp. BerOc1, strain BerOc1, strain SF3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.