STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
priA_2Phosphoribosyl isomerase A. (246 aa)    
Predicted Functional Partners:
OIQ51538.1
Hydantoinase/oxoprolinase.
 
     0.868
pyrH_1
Uridylate kinase.
 
     0.865
hisF_1
Imidazole glycerol phosphate synthase subunit HisF.
  
  
 0.803
hisF_2
Imidazole glycerol phosphate synthase subunit HisF.
  
  
 0.796
hisI
Phosphoribosyl-AMP cyclohydrolase.
  
  
  0.792
hisH1_1
Imidazole glycerol phosphate synthase subunit HisH 1.
  
  
  0.756
carB_2
Carbamoyl-phosphate synthase large chain.
 
     0.750
hisH1_2
Imidazole glycerol phosphate synthase subunit HisH 1.
  
  
  0.732
OIQ51540.1
Hypothetical protein.
 
   
 0.718
fhcD
Formyltransferase/hydrolase complex subunit D.
 
     0.706
Your Current Organism:
Desulfovibrio dechloracetivorans
NCBI taxonomy Id: 117209
Other names: ATCC 700912, D. dechloracetivorans, Desulfovibrio dechloracetivorans Sun et al. 2001, Desulfovibrio sp. BerOc1, strain BerOc1, strain SF3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.