Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ndhC_2 | nqo6 | BerOc1_01047 | BerOc1_00369 | NAD(P)H-quinone oxidoreductase subunit 3. | NADH-quinone oxidoreductase subunit 6. | 0.998 |
ndhC_2 | nuoC | BerOc1_01047 | BerOc1_01046 | NAD(P)H-quinone oxidoreductase subunit 3. | NADH-quinone oxidoreductase subunit C/D. | 0.999 |
ndhC_2 | nuoH_1 | BerOc1_01047 | BerOc1_00366 | NAD(P)H-quinone oxidoreductase subunit 3. | NADH-quinone oxidoreductase subunit H. | 0.998 |
ndhC_2 | nuoH_2 | BerOc1_01047 | BerOc1_01042 | NAD(P)H-quinone oxidoreductase subunit 3. | NADH-quinone oxidoreductase subunit H. | 0.999 |
ndhC_2 | nuoI_2 | BerOc1_01047 | BerOc1_01050 | NAD(P)H-quinone oxidoreductase subunit 3. | NADH-quinone oxidoreductase subunit I. | 0.997 |
ndhC_2 | nuoJ | BerOc1_01047 | BerOc1_01051 | NAD(P)H-quinone oxidoreductase subunit 3. | NADH-quinone oxidoreductase subunit J. | 0.997 |
ndhC_2 | nuoK_2 | BerOc1_01047 | BerOc1_01052 | NAD(P)H-quinone oxidoreductase subunit 3. | NADH-quinone oxidoreductase subunit K. | 0.999 |
ndhC_2 | nuoL | BerOc1_01047 | BerOc1_01053 | NAD(P)H-quinone oxidoreductase subunit 3. | NADH-quinone oxidoreductase subunit L. | 0.998 |
ndhC_2 | nuoM_2 | BerOc1_01047 | BerOc1_01054 | NAD(P)H-quinone oxidoreductase subunit 3. | NADH-quinone oxidoreductase subunit M. | 0.999 |
ndhC_2 | nuoN_2 | BerOc1_01047 | BerOc1_01055 | NAD(P)H-quinone oxidoreductase subunit 3. | NADH-quinone oxidoreductase subunit N. | 0.999 |
nqo6 | ndhC_2 | BerOc1_00369 | BerOc1_01047 | NADH-quinone oxidoreductase subunit 6. | NAD(P)H-quinone oxidoreductase subunit 3. | 0.998 |
nqo6 | nuoC | BerOc1_00369 | BerOc1_01046 | NADH-quinone oxidoreductase subunit 6. | NADH-quinone oxidoreductase subunit C/D. | 0.999 |
nqo6 | nuoH_1 | BerOc1_00369 | BerOc1_00366 | NADH-quinone oxidoreductase subunit 6. | NADH-quinone oxidoreductase subunit H. | 0.999 |
nqo6 | nuoH_2 | BerOc1_00369 | BerOc1_01042 | NADH-quinone oxidoreductase subunit 6. | NADH-quinone oxidoreductase subunit H. | 0.998 |
nqo6 | nuoI_2 | BerOc1_00369 | BerOc1_01050 | NADH-quinone oxidoreductase subunit 6. | NADH-quinone oxidoreductase subunit I. | 0.997 |
nqo6 | nuoJ | BerOc1_00369 | BerOc1_01051 | NADH-quinone oxidoreductase subunit 6. | NADH-quinone oxidoreductase subunit J. | 0.996 |
nqo6 | nuoK_2 | BerOc1_00369 | BerOc1_01052 | NADH-quinone oxidoreductase subunit 6. | NADH-quinone oxidoreductase subunit K. | 0.998 |
nqo6 | nuoL | BerOc1_00369 | BerOc1_01053 | NADH-quinone oxidoreductase subunit 6. | NADH-quinone oxidoreductase subunit L. | 0.997 |
nqo6 | nuoM_2 | BerOc1_00369 | BerOc1_01054 | NADH-quinone oxidoreductase subunit 6. | NADH-quinone oxidoreductase subunit M. | 0.998 |
nqo6 | nuoN_2 | BerOc1_00369 | BerOc1_01055 | NADH-quinone oxidoreductase subunit 6. | NADH-quinone oxidoreductase subunit N. | 0.998 |
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