STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIQ49369.1Hypothetical protein. (270 aa)    
Predicted Functional Partners:
OIQ51025.1
Hypothetical protein.
  
     0.680
OIQ52139.1
Electron transfer flavoprotein domain protein.
  
     0.640
OIQ48801.1
Hypothetical protein.
 
    0.591
OIQ49732.1
Hypothetical protein.
  
     0.590
OIQ51295.1
Hypothetical protein.
  
     0.580
OIQ49963.1
Hypothetical protein.
  
 
   0.564
OIQ51783.1
Hypothetical protein.
  
     0.557
OIQ50779.1
Hypothetical protein.
 
     0.551
OIQ51042.1
Hypothetical protein.
  
     0.543
flgD_1
Basal-body rod modification protein FlgD.
   
   0.534
Your Current Organism:
Desulfovibrio dechloracetivorans
NCBI taxonomy Id: 117209
Other names: ATCC 700912, D. dechloracetivorans, Desulfovibrio dechloracetivorans Sun et al. 2001, Desulfovibrio sp. BerOc1, strain BerOc1, strain SF3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.