STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
purTPhosphoribosylglycinamide formyltransferase 2. (393 aa)    
Predicted Functional Partners:
purE
N5-carboxyaminoimidazole ribonucleotide mutase.
 
 0.990
purL_1
Phosphoribosylformylglycinamidine synthase.
  
 
 0.977
purL_2
Phosphoribosylformylglycinamidine synthase 2.
  
 
 0.977
purD
Phosphoribosylamine--glycine ligase.
 
 
 0.958
purM
Phosphoribosylformylglycinamidine cyclo-ligase.
  
 
 0.956
purH_1
Bifunctional purine biosynthesis protein PurH.
   
 
 0.943
purH_2
Bifunctional purine biosynthesis protein PurH.
   
 
 0.942
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase.
  
 
 0.900
purN
Phosphoribosylglycinamide formyltransferase.
   
 
 0.893
purF
Amidophosphoribosyltransferase precursor.
  
  
 0.882
Your Current Organism:
Desulfovibrio dechloracetivorans
NCBI taxonomy Id: 117209
Other names: ATCC 700912, D. dechloracetivorans, Desulfovibrio dechloracetivorans Sun et al. 2001, Desulfovibrio sp. BerOc1, strain BerOc1, strain SF3
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