Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OIQ49640.1 | OIQ50341.1 | BerOc1_01565 | BerOc1_02272 | EamA-like transporter family protein. | Bacterial extracellular solute-binding protein, family 3. | 0.602 |
OIQ49640.1 | OIQ50342.1 | BerOc1_01565 | BerOc1_02273 | EamA-like transporter family protein. | Bacterial extracellular solute-binding protein, family 3. | 0.559 |
OIQ49640.1 | OIQ52139.1 | BerOc1_01565 | BerOc1_00612 | EamA-like transporter family protein. | Electron transfer flavoprotein domain protein. | 0.553 |
OIQ49640.1 | ecfT | BerOc1_01565 | BerOc1_00721 | EamA-like transporter family protein. | Energy-coupling factor transporter transmembrane protein EcfT. | 0.779 |
OIQ49640.1 | grpE | BerOc1_01565 | BerOc1_03109 | EamA-like transporter family protein. | Protein GrpE. | 0.595 |
OIQ49640.1 | mlaE_2 | BerOc1_01565 | BerOc1_03217 | EamA-like transporter family protein. | Putative phospholipid ABC transporter permease protein MlaE. | 0.739 |
OIQ49640.1 | nikQ | BerOc1_01565 | BerOc1_03586 | EamA-like transporter family protein. | Nickel transport protein NikQ. | 0.779 |
OIQ49640.1 | rpsC | BerOc1_01565 | BerOc1_03184 | EamA-like transporter family protein. | 30S ribosomal protein S3. | 0.600 |
OIQ49640.1 | rpsO | BerOc1_01565 | BerOc1_03303 | EamA-like transporter family protein. | 30S ribosomal protein S15. | 0.600 |
OIQ49640.1 | uppS | BerOc1_01565 | BerOc1_03256 | EamA-like transporter family protein. | Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific). | 0.780 |
OIQ50341.1 | OIQ49640.1 | BerOc1_02272 | BerOc1_01565 | Bacterial extracellular solute-binding protein, family 3. | EamA-like transporter family protein. | 0.602 |
OIQ50341.1 | OIQ50342.1 | BerOc1_02272 | BerOc1_02273 | Bacterial extracellular solute-binding protein, family 3. | Bacterial extracellular solute-binding protein, family 3. | 0.780 |
OIQ50341.1 | OIQ52139.1 | BerOc1_02272 | BerOc1_00612 | Bacterial extracellular solute-binding protein, family 3. | Electron transfer flavoprotein domain protein. | 0.548 |
OIQ50342.1 | OIQ49640.1 | BerOc1_02273 | BerOc1_01565 | Bacterial extracellular solute-binding protein, family 3. | EamA-like transporter family protein. | 0.559 |
OIQ50342.1 | OIQ50341.1 | BerOc1_02273 | BerOc1_02272 | Bacterial extracellular solute-binding protein, family 3. | Bacterial extracellular solute-binding protein, family 3. | 0.780 |
OIQ50342.1 | OIQ52139.1 | BerOc1_02273 | BerOc1_00612 | Bacterial extracellular solute-binding protein, family 3. | Electron transfer flavoprotein domain protein. | 0.561 |
OIQ52139.1 | OIQ49640.1 | BerOc1_00612 | BerOc1_01565 | Electron transfer flavoprotein domain protein. | EamA-like transporter family protein. | 0.553 |
OIQ52139.1 | OIQ50341.1 | BerOc1_00612 | BerOc1_02272 | Electron transfer flavoprotein domain protein. | Bacterial extracellular solute-binding protein, family 3. | 0.548 |
OIQ52139.1 | OIQ50342.1 | BerOc1_00612 | BerOc1_02273 | Electron transfer flavoprotein domain protein. | Bacterial extracellular solute-binding protein, family 3. | 0.561 |
ecfT | OIQ49640.1 | BerOc1_00721 | BerOc1_01565 | Energy-coupling factor transporter transmembrane protein EcfT. | EamA-like transporter family protein. | 0.779 |
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