Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OIQ49472.1 | OIQ49766.1 | BerOc1_01397 | BerOc1_01691 | Hypothetical protein. | Putative redox-active protein; C_GCAxxG_C_C. | 0.465 |
OIQ49472.1 | OIQ51783.1 | BerOc1_01397 | BerOc1_00241 | Hypothetical protein. | Hypothetical protein. | 0.734 |
OIQ49472.1 | recF | BerOc1_01397 | BerOc1_01690 | Hypothetical protein. | DNA replication and repair protein RecF. | 0.503 |
OIQ49762.1 | OIQ49763.1 | BerOc1_01687 | BerOc1_01688 | Hypothetical protein. | Hypothetical protein. | 0.800 |
OIQ49762.1 | OIQ49764.1 | BerOc1_01687 | BerOc1_01689 | Hypothetical protein. | Calcineurin-like phosphoesterase superfamily domain protein. | 0.800 |
OIQ49762.1 | OIQ49766.1 | BerOc1_01687 | BerOc1_01691 | Hypothetical protein. | Putative redox-active protein; C_GCAxxG_C_C. | 0.794 |
OIQ49762.1 | murJ | BerOc1_01687 | BerOc1_01693 | Hypothetical protein. | Putative peptidoglycan biosynthesis protein MurJ. | 0.790 |
OIQ49762.1 | recF | BerOc1_01687 | BerOc1_01690 | Hypothetical protein. | DNA replication and repair protein RecF. | 0.799 |
OIQ49762.1 | yfiC | BerOc1_01687 | BerOc1_01692 | Hypothetical protein. | tRNA1(Val) (adenine(37)-N6)-methyltransferase. | 0.791 |
OIQ49763.1 | OIQ49762.1 | BerOc1_01688 | BerOc1_01687 | Hypothetical protein. | Hypothetical protein. | 0.800 |
OIQ49763.1 | OIQ49764.1 | BerOc1_01688 | BerOc1_01689 | Hypothetical protein. | Calcineurin-like phosphoesterase superfamily domain protein. | 0.800 |
OIQ49763.1 | OIQ49766.1 | BerOc1_01688 | BerOc1_01691 | Hypothetical protein. | Putative redox-active protein; C_GCAxxG_C_C. | 0.794 |
OIQ49763.1 | murJ | BerOc1_01688 | BerOc1_01693 | Hypothetical protein. | Putative peptidoglycan biosynthesis protein MurJ. | 0.790 |
OIQ49763.1 | recF | BerOc1_01688 | BerOc1_01690 | Hypothetical protein. | DNA replication and repair protein RecF. | 0.800 |
OIQ49763.1 | yfiC | BerOc1_01688 | BerOc1_01692 | Hypothetical protein. | tRNA1(Val) (adenine(37)-N6)-methyltransferase. | 0.791 |
OIQ49764.1 | OIQ49762.1 | BerOc1_01689 | BerOc1_01687 | Calcineurin-like phosphoesterase superfamily domain protein. | Hypothetical protein. | 0.800 |
OIQ49764.1 | OIQ49763.1 | BerOc1_01689 | BerOc1_01688 | Calcineurin-like phosphoesterase superfamily domain protein. | Hypothetical protein. | 0.800 |
OIQ49764.1 | OIQ49766.1 | BerOc1_01689 | BerOc1_01691 | Calcineurin-like phosphoesterase superfamily domain protein. | Putative redox-active protein; C_GCAxxG_C_C. | 0.794 |
OIQ49764.1 | murJ | BerOc1_01689 | BerOc1_01693 | Calcineurin-like phosphoesterase superfamily domain protein. | Putative peptidoglycan biosynthesis protein MurJ. | 0.799 |
OIQ49764.1 | recF | BerOc1_01689 | BerOc1_01690 | Calcineurin-like phosphoesterase superfamily domain protein. | DNA replication and repair protein RecF. | 0.861 |
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