STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIQ49986.1Hypothetical protein. (76 aa)    
Predicted Functional Partners:
msrAB
Peptide methionine sulfoxide reductase MsrA/MsrB.
   
 0.984
ahpC
Alkyl hydroperoxide reductase subunit C.
  
 0.969
OIQ49987.1
Putative permease.
 
  
 0.947
dnaK
Chaperone protein DnaK.
  
 0.925
OIQ50572.1
NADH oxidase.
  
 0.904
dnaJ_1
Chaperone protein DnaJ.
    
 0.899
dnaJ_2
Chaperone protein DnaJ.
    
 0.899
hmcA_2
High-molecular-weight cytochrome c precursor.
    
 0.899
OIQ50773.1
Acidic cytochrome c3 precursor.
    
 0.899
cbpA
Curved DNA-binding protein.
    
 0.899
Your Current Organism:
Desulfovibrio dechloracetivorans
NCBI taxonomy Id: 117209
Other names: ATCC 700912, D. dechloracetivorans, Desulfovibrio dechloracetivorans Sun et al. 2001, Desulfovibrio sp. BerOc1, strain BerOc1, strain SF3
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.