Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OIQ50233.1 | arcB_1 | BerOc1_02164 | BerOc1_01666 | Blue-light-activated protein. | Aerobic respiration control sensor protein ArcB. | 0.996 |
OIQ50233.1 | arcB_3 | BerOc1_02164 | BerOc1_01786 | Blue-light-activated protein. | Aerobic respiration control sensor protein ArcB. | 0.995 |
OIQ50233.1 | barA_1 | BerOc1_02164 | BerOc1_00453 | Blue-light-activated protein. | Signal transduction histidine-protein kinase BarA. | 0.999 |
OIQ50233.1 | barA_4 | BerOc1_02164 | BerOc1_02576 | Blue-light-activated protein. | Signal transduction histidine-protein kinase BarA. | 0.999 |
OIQ50233.1 | luxQ_10 | BerOc1_02164 | BerOc1_02807 | Blue-light-activated protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.997 |
OIQ50233.1 | luxQ_4 | BerOc1_02164 | BerOc1_01131 | Blue-light-activated protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.997 |
OIQ50233.1 | pleC_1 | BerOc1_02164 | BerOc1_01498 | Blue-light-activated protein. | Non-motile and phage-resistance protein. | 0.994 |
OIQ50233.1 | rpfC_1 | BerOc1_02164 | BerOc1_00609 | Blue-light-activated protein. | Sensory/regulatory protein RpfC. | 0.995 |
OIQ50233.1 | rpfC_2 | BerOc1_02164 | BerOc1_01669 | Blue-light-activated protein. | Sensory/regulatory protein RpfC. | 0.994 |
OIQ50233.1 | rpfC_3 | BerOc1_02164 | BerOc1_02573 | Blue-light-activated protein. | Sensory/regulatory protein RpfC. | 0.999 |
arcB_1 | OIQ50233.1 | BerOc1_01666 | BerOc1_02164 | Aerobic respiration control sensor protein ArcB. | Blue-light-activated protein. | 0.996 |
arcB_1 | arcB_3 | BerOc1_01666 | BerOc1_01786 | Aerobic respiration control sensor protein ArcB. | Aerobic respiration control sensor protein ArcB. | 0.999 |
arcB_1 | barA_1 | BerOc1_01666 | BerOc1_00453 | Aerobic respiration control sensor protein ArcB. | Signal transduction histidine-protein kinase BarA. | 0.999 |
arcB_1 | barA_4 | BerOc1_01666 | BerOc1_02576 | Aerobic respiration control sensor protein ArcB. | Signal transduction histidine-protein kinase BarA. | 0.999 |
arcB_1 | luxQ_10 | BerOc1_01666 | BerOc1_02807 | Aerobic respiration control sensor protein ArcB. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.999 |
arcB_1 | luxQ_4 | BerOc1_01666 | BerOc1_01131 | Aerobic respiration control sensor protein ArcB. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.999 |
arcB_1 | pleC_1 | BerOc1_01666 | BerOc1_01498 | Aerobic respiration control sensor protein ArcB. | Non-motile and phage-resistance protein. | 0.998 |
arcB_1 | rpfC_1 | BerOc1_01666 | BerOc1_00609 | Aerobic respiration control sensor protein ArcB. | Sensory/regulatory protein RpfC. | 0.997 |
arcB_1 | rpfC_2 | BerOc1_01666 | BerOc1_01669 | Aerobic respiration control sensor protein ArcB. | Sensory/regulatory protein RpfC. | 0.998 |
arcB_1 | rpfC_3 | BerOc1_01666 | BerOc1_02573 | Aerobic respiration control sensor protein ArcB. | Sensory/regulatory protein RpfC. | 0.999 |
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