STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mepHMurein DD-endopeptidase MepH precursor. (169 aa)    
Predicted Functional Partners:
OIQ50403.1
Flagellar basal body-associated protein FliL.
  
   0.787
osmY_1
Osmotically-inducible protein Y precursor.
       0.773
OIQ51738.1
Flagellar basal body-associated protein FliL.
  
   0.536
OIQ50537.1
Hypothetical protein.
       0.530
OIQ50538.1
Hypothetical protein.
       0.526
OIQ51932.1
Bacterial SH3 domain protein.
  
  
 0.484
manX
PTS system mannose-specific EIIAB component.
     
 0.454
mltD_2
Membrane-bound lytic murein transglycosylase D precursor.
  
  
 0.447
yrrB_3
TPR repeat-containing protein YrrB.
   
 0.433
Your Current Organism:
Desulfovibrio dechloracetivorans
NCBI taxonomy Id: 117209
Other names: ATCC 700912, D. dechloracetivorans, Desulfovibrio dechloracetivorans Sun et al. 2001, Desulfovibrio sp. BerOc1, strain BerOc1, strain SF3
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.