Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OIQ49097.1 | OIQ49764.1 | BerOc1_01017 | BerOc1_01689 | Sulfate transporter family protein. | Calcineurin-like phosphoesterase superfamily domain protein. | 0.962 |
OIQ49097.1 | OIQ52397.1 | BerOc1_01017 | BerOc1_00873 | Sulfate transporter family protein. | Hypothetical protein. | 0.802 |
OIQ49097.1 | csgA | BerOc1_01017 | BerOc1_02729 | Sulfate transporter family protein. | C-factor. | 0.886 |
OIQ49097.1 | nuoC | BerOc1_01017 | BerOc1_01046 | Sulfate transporter family protein. | NADH-quinone oxidoreductase subunit C/D. | 0.489 |
OIQ49097.1 | nuoM_1 | BerOc1_01017 | BerOc1_00359 | Sulfate transporter family protein. | NADH-quinone oxidoreductase subunit M. | 0.946 |
OIQ49097.1 | nuoM_2 | BerOc1_01017 | BerOc1_01054 | Sulfate transporter family protein. | NADH-quinone oxidoreductase subunit M. | 0.946 |
OIQ49764.1 | OIQ49097.1 | BerOc1_01689 | BerOc1_01017 | Calcineurin-like phosphoesterase superfamily domain protein. | Sulfate transporter family protein. | 0.962 |
OIQ49764.1 | OIQ51271.1 | BerOc1_01689 | BerOc1_03221 | Calcineurin-like phosphoesterase superfamily domain protein. | Putative sulfate transporter. | 0.962 |
OIQ49764.1 | OIQ51782.1 | BerOc1_01689 | BerOc1_00240 | Calcineurin-like phosphoesterase superfamily domain protein. | Putative sulfate transporter. | 0.966 |
OIQ49764.1 | bicA | BerOc1_01689 | BerOc1_03724 | Calcineurin-like phosphoesterase superfamily domain protein. | Bicarbonate transporter BicA. | 0.962 |
OIQ49764.1 | csgA | BerOc1_01689 | BerOc1_02729 | Calcineurin-like phosphoesterase superfamily domain protein. | C-factor. | 0.955 |
OIQ49764.1 | nuoC | BerOc1_01689 | BerOc1_01046 | Calcineurin-like phosphoesterase superfamily domain protein. | NADH-quinone oxidoreductase subunit C/D. | 0.465 |
OIQ51271.1 | OIQ49764.1 | BerOc1_03221 | BerOc1_01689 | Putative sulfate transporter. | Calcineurin-like phosphoesterase superfamily domain protein. | 0.962 |
OIQ51271.1 | OIQ51782.1 | BerOc1_03221 | BerOc1_00240 | Putative sulfate transporter. | Putative sulfate transporter. | 0.510 |
OIQ51271.1 | OIQ52397.1 | BerOc1_03221 | BerOc1_00873 | Putative sulfate transporter. | Hypothetical protein. | 0.851 |
OIQ51271.1 | csgA | BerOc1_03221 | BerOc1_02729 | Putative sulfate transporter. | C-factor. | 0.886 |
OIQ51271.1 | nuoC | BerOc1_03221 | BerOc1_01046 | Putative sulfate transporter. | NADH-quinone oxidoreductase subunit C/D. | 0.489 |
OIQ51271.1 | nuoM_1 | BerOc1_03221 | BerOc1_00359 | Putative sulfate transporter. | NADH-quinone oxidoreductase subunit M. | 0.946 |
OIQ51271.1 | nuoM_2 | BerOc1_03221 | BerOc1_01054 | Putative sulfate transporter. | NADH-quinone oxidoreductase subunit M. | 0.946 |
OIQ51782.1 | OIQ49764.1 | BerOc1_00240 | BerOc1_01689 | Putative sulfate transporter. | Calcineurin-like phosphoesterase superfamily domain protein. | 0.966 |
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