STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyaA_3Adenylate cyclase 1. (722 aa)    
Predicted Functional Partners:
OIQ51782.1
Putative sulfate transporter.
 
 0.962
crp_3
cAMP receptor protein.
 
 0.953
luxQ_10
Autoinducer 2 sensor kinase/phosphatase LuxQ.
   
 0.940
crp_2
cAMP receptor protein.
 
 0.898
rpfC_3
Sensory/regulatory protein RpfC.
   
 0.890
barA_4
Signal transduction histidine-protein kinase BarA.
 
 0.887
crp_4
cAMP receptor protein.
 
 0.883
OIQ50685.1
Blue-light-activated protein.
 0.881
barA_1
Signal transduction histidine-protein kinase BarA.
 
 
 0.878
pleC_1
Non-motile and phage-resistance protein.
 
 0.877
Your Current Organism:
Desulfovibrio dechloracetivorans
NCBI taxonomy Id: 117209
Other names: ATCC 700912, D. dechloracetivorans, Desulfovibrio dechloracetivorans Sun et al. 2001, Desulfovibrio sp. BerOc1, strain BerOc1, strain SF3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.