Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OIQ49078.1 | OIQ49215.1 | BerOc1_00998 | BerOc1_01139 | Hypothetical protein. | Putative glycosyl hydrolase. | 0.884 |
OIQ49078.1 | OIQ50829.1 | BerOc1_00998 | BerOc1_02771 | Hypothetical protein. | Glycosyl hydrolase family 57. | 0.682 |
OIQ49078.1 | OIQ50830.1 | BerOc1_00998 | BerOc1_02772 | Hypothetical protein. | Glycogen synthase. | 0.668 |
OIQ49078.1 | OIQ50831.1 | BerOc1_00998 | BerOc1_02773 | Hypothetical protein. | Amylo-alpha-1,6-glucosidase. | 0.907 |
OIQ49078.1 | algC | BerOc1_00998 | BerOc1_00803 | Hypothetical protein. | Phosphomannomutase/phosphoglucomutase. | 0.828 |
OIQ49078.1 | glmM | BerOc1_00998 | BerOc1_00403 | Hypothetical protein. | Phosphoglucosamine mutase. | 0.828 |
OIQ49078.1 | hddC | BerOc1_00998 | BerOc1_00308 | Hypothetical protein. | D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase. | 0.793 |
OIQ49078.1 | malP | BerOc1_00998 | BerOc1_02770 | Hypothetical protein. | Maltodextrin phosphorylase. | 0.992 |
OIQ49215.1 | OIQ49078.1 | BerOc1_01139 | BerOc1_00998 | Putative glycosyl hydrolase. | Hypothetical protein. | 0.884 |
OIQ49215.1 | OIQ50829.1 | BerOc1_01139 | BerOc1_02771 | Putative glycosyl hydrolase. | Glycosyl hydrolase family 57. | 0.655 |
OIQ49215.1 | OIQ50830.1 | BerOc1_01139 | BerOc1_02772 | Putative glycosyl hydrolase. | Glycogen synthase. | 0.697 |
OIQ49215.1 | OIQ50831.1 | BerOc1_01139 | BerOc1_02773 | Putative glycosyl hydrolase. | Amylo-alpha-1,6-glucosidase. | 0.774 |
OIQ49215.1 | algC | BerOc1_01139 | BerOc1_00803 | Putative glycosyl hydrolase. | Phosphomannomutase/phosphoglucomutase. | 0.501 |
OIQ49215.1 | glmM | BerOc1_01139 | BerOc1_00403 | Putative glycosyl hydrolase. | Phosphoglucosamine mutase. | 0.501 |
OIQ49215.1 | malP | BerOc1_01139 | BerOc1_02770 | Putative glycosyl hydrolase. | Maltodextrin phosphorylase. | 0.890 |
OIQ50829.1 | OIQ49078.1 | BerOc1_02771 | BerOc1_00998 | Glycosyl hydrolase family 57. | Hypothetical protein. | 0.682 |
OIQ50829.1 | OIQ49215.1 | BerOc1_02771 | BerOc1_01139 | Glycosyl hydrolase family 57. | Putative glycosyl hydrolase. | 0.655 |
OIQ50829.1 | OIQ50830.1 | BerOc1_02771 | BerOc1_02772 | Glycosyl hydrolase family 57. | Glycogen synthase. | 0.963 |
OIQ50829.1 | OIQ50831.1 | BerOc1_02771 | BerOc1_02773 | Glycosyl hydrolase family 57. | Amylo-alpha-1,6-glucosidase. | 0.974 |
OIQ50829.1 | algC | BerOc1_02771 | BerOc1_00803 | Glycosyl hydrolase family 57. | Phosphomannomutase/phosphoglucomutase. | 0.648 |
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