Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OIQ49990.1 | OIQ50763.1 | BerOc1_01919 | BerOc1_02705 | MOSC domain protein. | MoaE protein. | 0.730 |
OIQ49990.1 | cinA_3 | BerOc1_01919 | BerOc1_02845 | MOSC domain protein. | Putative competence-damage inducible protein. | 0.781 |
OIQ49990.1 | fdhD_2 | BerOc1_01919 | BerOc1_02741 | MOSC domain protein. | Protein FdhD. | 0.468 |
OIQ49990.1 | mog | BerOc1_01919 | BerOc1_00274 | MOSC domain protein. | Molybdopterin adenylyltransferase. | 0.989 |
OIQ50763.1 | OIQ49990.1 | BerOc1_02705 | BerOc1_01919 | MoaE protein. | MOSC domain protein. | 0.730 |
OIQ50763.1 | OIQ51772.1 | BerOc1_02705 | BerOc1_00230 | MoaE protein. | ThiS family protein. | 0.997 |
OIQ50763.1 | cinA_3 | BerOc1_02705 | BerOc1_02845 | MoaE protein. | Putative competence-damage inducible protein. | 0.727 |
OIQ50763.1 | fdhD_2 | BerOc1_02705 | BerOc1_02741 | MoaE protein. | Protein FdhD. | 0.830 |
OIQ50763.1 | mobB | BerOc1_02705 | BerOc1_01630 | MoaE protein. | Molybdopterin-guanine dinucleotide biosynthesis adapter protein. | 0.745 |
OIQ50763.1 | mog | BerOc1_02705 | BerOc1_00274 | MoaE protein. | Molybdopterin adenylyltransferase. | 0.897 |
OIQ51772.1 | OIQ50763.1 | BerOc1_00230 | BerOc1_02705 | ThiS family protein. | MoaE protein. | 0.997 |
OIQ51772.1 | cinA_3 | BerOc1_00230 | BerOc1_02845 | ThiS family protein. | Putative competence-damage inducible protein. | 0.724 |
OIQ51772.1 | fdhD_2 | BerOc1_00230 | BerOc1_02741 | ThiS family protein. | Protein FdhD. | 0.750 |
OIQ51772.1 | mobB | BerOc1_00230 | BerOc1_01630 | ThiS family protein. | Molybdopterin-guanine dinucleotide biosynthesis adapter protein. | 0.612 |
OIQ51772.1 | mog | BerOc1_00230 | BerOc1_00274 | ThiS family protein. | Molybdopterin adenylyltransferase. | 0.893 |
OIQ51772.1 | puuR_2 | BerOc1_00230 | BerOc1_02844 | ThiS family protein. | HTH-type transcriptional regulator PuuR. | 0.724 |
atpE | cinA_3 | BerOc1_02106 | BerOc1_02845 | ATP synthase subunit c. | Putative competence-damage inducible protein. | 0.780 |
cinA_3 | OIQ49990.1 | BerOc1_02845 | BerOc1_01919 | Putative competence-damage inducible protein. | MOSC domain protein. | 0.781 |
cinA_3 | OIQ50763.1 | BerOc1_02845 | BerOc1_02705 | Putative competence-damage inducible protein. | MoaE protein. | 0.727 |
cinA_3 | OIQ51772.1 | BerOc1_02845 | BerOc1_00230 | Putative competence-damage inducible protein. | ThiS family protein. | 0.724 |
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