STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIQ51168.1Hypothetical protein. (673 aa)    
Predicted Functional Partners:
livH_2
High-affinity branched-chain amino acid transport system permease protein LivH.
  
 
 0.970
OIQ50483.1
Leucine/isoleucine/valine transporter permease subunit.
  
 
 0.836
OIQ51113.1
Leucine/isoleucine/valine transporter permease subunit.
  
 
 0.836
OIQ48946.1
Putative permease YjgP/YjgQ family protein.
 
  
  0.826
ccmE
Cytochrome c-type biogenesis protein CcmE.
  
  
  0.814
OIQ48756.1
Hypothetical protein.
  
  
  0.805
OIQ49026.1
Leucine/isoleucine/valine transporter permease subunit.
  
 
 0.804
bamD_1
Outer membrane protein assembly factor BamD.
  
  
  0.803
OIQ48945.1
Putative permease YjgP/YjgQ family protein.
 
  
  0.803
livH_3
High-affinity branched-chain amino acid transport system permease protein LivH.
  
 
 0.795
Your Current Organism:
Desulfovibrio dechloracetivorans
NCBI taxonomy Id: 117209
Other names: ATCC 700912, D. dechloracetivorans, Desulfovibrio dechloracetivorans Sun et al. 2001, Desulfovibrio sp. BerOc1, strain BerOc1, strain SF3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.