STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIQ51385.1ABC transporter, phosphonate, periplasmic substrate-binding protein. (293 aa)    
Predicted Functional Partners:
phnE_2
Phosphate-import permease protein PhnE.
 
 
 0.998
phnC_2
Phosphate-import ATP-binding protein PhnC.
 
 
 0.984
phnE_1
Phosphate-import permease protein PhnE.
 
 
 0.958
phnC_1
Phosphate-import ATP-binding protein PhnC.
 
 
 0.954
phnD_1
Phosphate-import protein PhnD precursor.
  
  
  0.906
phnD_2
Phosphate-import protein PhnD precursor.
 
  
 
0.877
mlaE_2
Putative phospholipid ABC transporter permease protein MlaE.
    
  0.869
barA_4
Signal transduction histidine-protein kinase BarA.
  
 
 0.835
rpfC_3
Sensory/regulatory protein RpfC.
  
 
 0.831
barA_1
Signal transduction histidine-protein kinase BarA.
  
 
 0.829
Your Current Organism:
Desulfovibrio dechloracetivorans
NCBI taxonomy Id: 117209
Other names: ATCC 700912, D. dechloracetivorans, Desulfovibrio dechloracetivorans Sun et al. 2001, Desulfovibrio sp. BerOc1, strain BerOc1, strain SF3
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